Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
THBS1P07996 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
THBS1P07996 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
THBS1P07996 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 CHCHD2P8-201ENST00000429873 447 ntBASIC16.13■□□□□ 0.17
THBS1P07996 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
THBS1P07996 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.13■□□□□ 0.17
THBS1P07996 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
THBS1P07996 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.13■□□□□ 0.17
THBS1P07996 KRT18P56-201ENST00000507275 550 ntBASIC16.13■□□□□ 0.17
THBS1P07996 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.13■□□□□ 0.17
THBS1P07996 AC111152.3-201ENST00000569699 673 ntBASIC16.13■□□□□ 0.17
THBS1P07996 AC012183.1-201ENST00000625197 499 ntBASIC16.13■□□□□ 0.17
THBS1P07996 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.13■□□□□ 0.17
THBS1P07996 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.13■□□□□ 0.17
THBS1P07996 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.13■□□□□ 0.17
THBS1P07996 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
THBS1P07996 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
THBS1P07996 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
THBS1P07996 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
THBS1P07996 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
THBS1P07996 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
THBS1P07996 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.12■□□□□ 0.17
THBS1P07996 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.12■□□□□ 0.17
THBS1P07996 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.12■□□□□ 0.17
THBS1P07996 AC009533.2-201ENST00000543664 586 ntBASIC16.12■□□□□ 0.17
THBS1P07996 KRT126P-201ENST00000549467 1181 ntBASIC16.12■□□□□ 0.17
THBS1P07996 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.12■□□□□ 0.17
THBS1P07996 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.12■□□□□ 0.17
THBS1P07996 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
THBS1P07996 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.12■□□□□ 0.17
THBS1P07996 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.12■□□□□ 0.17
THBS1P07996 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 AL049757.1-201ENST00000616842 1596 ntBASIC16.12■□□□□ 0.17
THBS1P07996 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
THBS1P07996 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.12■□□□□ 0.17
THBS1P07996 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
THBS1P07996 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
THBS1P07996 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 AD000864.1-201ENST00000624076 2295 ntBASIC16.11■□□□□ 0.17
THBS1P07996 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
THBS1P07996 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms