Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
APOC3P02656 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC3P02656 ST20-AS1-201ENST00000560255 4223 ntBASIC14.1□□□□□ -0.15
APOC3P02656 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC3P02656 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC3P02656 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.09□□□□□ -0.15
APOC3P02656 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC3P02656 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC3P02656 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC3P02656 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOC3P02656 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOC3P02656 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC3P02656 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC3P02656 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.08□□□□□ -0.15
APOC3P02656 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
APOC3P02656 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.08□□□□□ -0.15
APOC3P02656 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC3P02656 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.08□□□□□ -0.15
APOC3P02656 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
APOC3P02656 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.08□□□□□ -0.16
APOC3P02656 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
APOC3P02656 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.08□□□□□ -0.16
APOC3P02656 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.08□□□□□ -0.16
APOC3P02656 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 AC026748.1-201ENST00000624349 3251 ntBASIC14.08□□□□□ -0.16
APOC3P02656 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC3P02656 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC3P02656 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOC3P02656 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 KRT8P32-201ENST00000512863 1461 ntBASIC14.07□□□□□ -0.16
APOC3P02656 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms