Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.03□□□□□ -0.16
NDUFA3O95167 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 AC096582.2-201ENST00000510860 516 ntBASIC14.03□□□□□ -0.16
NDUFA3O95167 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.03□□□□□ -0.16
NDUFA3O95167 AC111152.3-201ENST00000569699 673 ntBASIC14.03□□□□□ -0.16
NDUFA3O95167 AL139327.4-201ENST00000612362 153 ntBASIC14.03□□□□□ -0.16
NDUFA3O95167 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 AL049757.1-201ENST00000616842 1596 ntBASIC14.03□□□□□ -0.16
NDUFA3O95167 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
NDUFA3O95167 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA3O95167 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA3O95167 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA3O95167 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NDUFA3O95167 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA3O95167 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NDUFA3O95167 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA3O95167 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA3O95167 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.02□□□□□ -0.16
NDUFA3O95167 AL353593.2-201ENST00000602529 1483 ntBASIC14.02□□□□□ -0.16
NDUFA3O95167 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA3O95167 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NDUFA3O95167 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.02□□□□□ -0.17
NDUFA3O95167 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.02□□□□□ -0.17
NDUFA3O95167 AC109462.3-201ENST00000573934 613 ntBASIC14.02□□□□□ -0.17
NDUFA3O95167 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA3O95167 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NDUFA3O95167 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NDUFA3O95167 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA3O95167 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NDUFA3O95167 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA3O95167 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA3O95167 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 SIRPAP1-201ENST00000448467 1770 ntBASIC14.01□□□□□ -0.17
NDUFA3O95167 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
NDUFA3O95167 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA3O95167 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA3O95167 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.01□□□□□ -0.17
NDUFA3O95167 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.01□□□□□ -0.17
NDUFA3O95167 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NDUFA3O95167 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms