Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.78■□□□□ 0.44
USP1O94782 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
USP1O94782 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
USP1O94782 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
USP1O94782 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 LYSMD4-203ENST00000378904 2122 ntBASIC17.77■□□□□ 0.44
USP1O94782 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 Z83836.1-201ENST00000624605 1642 ntBASIC17.77■□□□□ 0.44
USP1O94782 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USP1O94782 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.77■□□□□ 0.44
USP1O94782 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.77■□□□□ 0.44
USP1O94782 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 AC022616.7-201ENST00000525383 220 ntBASIC17.77■□□□□ 0.44
USP1O94782 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.77■□□□□ 0.44
USP1O94782 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.77■□□□□ 0.44
USP1O94782 RNF126P1-202ENST00000569893 925 ntBASIC17.77■□□□□ 0.44
USP1O94782 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.77■□□□□ 0.44
USP1O94782 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
USP1O94782 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP1O94782 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP1O94782 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
USP1O94782 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP1O94782 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP1O94782 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP1O94782 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 AC097374.2-201ENST00000618617 1306 ntBASIC17.76■□□□□ 0.43
USP1O94782 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 AC016396.2-201ENST00000562575 1417 ntBASIC17.76■□□□□ 0.43
USP1O94782 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
USP1O94782 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 SPDYE13P-201ENST00000445314 798 ntBASIC17.76■□□□□ 0.43
USP1O94782 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.76■□□□□ 0.43
USP1O94782 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.76■□□□□ 0.43
USP1O94782 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.76■□□□□ 0.43
USP1O94782 AC083849.1-201ENST00000615227 514 ntBASIC17.76■□□□□ 0.43
USP1O94782 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
USP1O94782 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP1O94782 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
USP1O94782 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.76■□□□□ 0.43
USP1O94782 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP1O94782 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.75■□□□□ 0.43
USP1O94782 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.75■□□□□ 0.43
USP1O94782 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.75■□□□□ 0.43
USP1O94782 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms