Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 AL450487.1-201ENST00000426799 995 ntBASIC17.43■□□□□ 0.38
KLHL41O60662 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
KLHL41O60662 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
KLHL41O60662 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
KLHL41O60662 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 KRT8P7-201ENST00000533003 1432 ntBASIC17.43■□□□□ 0.38
KLHL41O60662 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.43■□□□□ 0.38
KLHL41O60662 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KLHL41O60662 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KLHL41O60662 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KLHL41O60662 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 ATP5G2P1-201ENST00000433580 426 ntBASIC17.42■□□□□ 0.38
KLHL41O60662 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 AC083849.1-201ENST00000615227 514 ntBASIC17.42■□□□□ 0.38
KLHL41O60662 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KLHL41O60662 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KLHL41O60662 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KLHL41O60662 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KLHL41O60662 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KLHL41O60662 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KLHL41O60662 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.41■□□□□ 0.38
KLHL41O60662 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.41■□□□□ 0.38
KLHL41O60662 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.41■□□□□ 0.38
KLHL41O60662 RASA4DP-201ENST00000460726 1199 ntBASIC17.41■□□□□ 0.38
KLHL41O60662 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.41■□□□□ 0.38
KLHL41O60662 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.41■□□□□ 0.38
KLHL41O60662 AC009065.1-201ENST00000564055 1225 ntBASIC17.41■□□□□ 0.38
KLHL41O60662 HYMAI.1-201ENST00000620949 238 ntBASIC17.41■□□□□ 0.38
KLHL41O60662 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KLHL41O60662 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
KLHL41O60662 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.41■□□□□ 0.38
KLHL41O60662 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KLHL41O60662 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms