Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUBNO60494 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 SPDYE11-202ENST00000450699 704 ntBASIC13.9□□□□□ -0.18
CUBNO60494 SPDYE9P-201ENST00000570642 692 ntBASIC13.9□□□□□ -0.18
CUBNO60494 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 SPDYE10P-202ENST00000612005 668 ntBASIC13.9□□□□□ -0.18
CUBNO60494 SPDYE8P-202ENST00000612377 668 ntBASIC13.9□□□□□ -0.18
CUBNO60494 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.9□□□□□ -0.18
CUBNO60494 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.9□□□□□ -0.18
CUBNO60494 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CUBNO60494 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 SPDYE14P-201ENST00000442619 822 ntBASIC13.9□□□□□ -0.18
CUBNO60494 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 AC004890.2-204ENST00000481968 304 ntBASIC13.9□□□□□ -0.18
CUBNO60494 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.9□□□□□ -0.18
CUBNO60494 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.9□□□□□ -0.18
CUBNO60494 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.9□□□□□ -0.18
CUBNO60494 AL390754.1-201ENST00000619088 582 ntBASIC13.9□□□□□ -0.18
CUBNO60494 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.9□□□□□ -0.18
CUBNO60494 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.9□□□□□ -0.18
CUBNO60494 AC116407.2-201ENST00000613639 860 ntBASIC13.9□□□□□ -0.18
CUBNO60494 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUBNO60494 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CUBNO60494 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.89□□□□□ -0.19
CUBNO60494 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 AP001059.3-201ENST00000619053 235 ntBASIC13.89□□□□□ -0.19
CUBNO60494 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.89□□□□□ -0.19
CUBNO60494 AC107890.1-201ENST00000422478 521 ntBASIC13.89□□□□□ -0.19
CUBNO60494 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.89□□□□□ -0.19
CUBNO60494 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 KRT18P32-201ENST00000424695 1287 ntBASIC13.89□□□□□ -0.19
CUBNO60494 CR383656.12-201ENST00000549567 513 ntBASIC13.89□□□□□ -0.19
CUBNO60494 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.89□□□□□ -0.19
CUBNO60494 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.89□□□□□ -0.19
CUBNO60494 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.89□□□□□ -0.19
CUBNO60494 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUBNO60494 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CUBNO60494 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUBNO60494 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CUBNO60494 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.88□□□□□ -0.19
CUBNO60494 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUBNO60494 PIN1P1-201ENST00000412108 996 ntBASIC13.88□□□□□ -0.19
CUBNO60494 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.88□□□□□ -0.19
CUBNO60494 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CUBNO60494 PI4KAP1-204ENST00000612579 1703 ntBASIC13.88□□□□□ -0.19
CUBNO60494 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUBNO60494 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUBNO60494 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.88□□□□□ -0.19
CUBNO60494 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CUBNO60494 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.88□□□□□ -0.19
CUBNO60494 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUBNO60494 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms