Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.7■□□□□ 0.1
CXCL13O43927 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 AC009078.2-202ENST00000463353 338 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 BX005266.1-201ENST00000473402 457 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.7■□□□□ 0.1
CXCL13O43927 STK19B-204ENST00000512515 211 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 STK25P1-201ENST00000585406 838 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.7■□□□□ 0.1
CXCL13O43927 AL139288.1-201ENST00000623748 933 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 AC068880.1-201ENST00000507289 2297 ntBASIC15.7■□□□□ 0.1
CXCL13O43927 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CXCL13O43927 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCL13O43927 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCL13O43927 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.7■□□□□ 0.1
CXCL13O43927 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCL13O43927 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CXCL13O43927 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 SPDYE21P-201ENST00000413323 827 ntBASIC15.69■□□□□ 0.1
CXCL13O43927 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 AC073648.2-201ENST00000510116 352 ntBASIC15.69■□□□□ 0.1
CXCL13O43927 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.69■□□□□ 0.1
CXCL13O43927 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CXCL13O43927 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.69■□□□□ 0.1
CXCL13O43927 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.69■□□□□ 0.1
CXCL13O43927 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.69■□□□□ 0.1
CXCL13O43927 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.69■□□□□ 0.1
CXCL13O43927 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CXCL13O43927 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CXCL13O43927 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CXCL13O43927 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 HLA-J-201ENST00000462773 1622 ntBASIC15.68■□□□□ 0.1
CXCL13O43927 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 AC004817.3-201ENST00000602957 2129 ntBASIC15.68■□□□□ 0.1
CXCL13O43927 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CXCL13O43927 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 AL020989.1-201ENST00000422979 469 ntBASIC15.68■□□□□ 0.1
CXCL13O43927 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.68■□□□□ 0.1
CXCL13O43927 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 AF186996.4-201ENST00000467186 377 ntBASIC15.68■□□□□ 0.1
CXCL13O43927 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.68■□□□□ 0.1
CXCL13O43927 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.68■□□□□ 0.1
CXCL13O43927 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.68■□□□□ 0.1
CXCL13O43927 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CXCL13O43927 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms