Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA2O43364 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA2O43364 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA2O43364 AL031432.2-201ENST00000566714 459 ntBASIC18.65■□□□□ 0.58
HOXA2O43364 AL928711.1-201ENST00000570165 459 ntBASIC18.65■□□□□ 0.58
HOXA2O43364 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA2O43364 AC068137.2-201ENST00000605408 478 ntBASIC18.65■□□□□ 0.58
HOXA2O43364 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA2O43364 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 AL135999.2-201ENST00000622438 1686 ntBASIC18.65■□□□□ 0.58
HOXA2O43364 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA2O43364 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXA2O43364 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXA2O43364 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA2O43364 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA2O43364 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HOXA2O43364 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
HOXA2O43364 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA2O43364 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXA2O43364 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
HOXA2O43364 FAM185BP-201ENST00000443595 716 ntBASIC18.64■□□□□ 0.57
HOXA2O43364 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA2O43364 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 RFPL4AP1-201ENST00000530883 850 ntBASIC18.64■□□□□ 0.57
HOXA2O43364 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA2O43364 AC091812.2-201ENST00000619081 385 ntBASIC18.64■□□□□ 0.57
HOXA2O43364 LINC01451-201ENST00000623792 534 ntBASIC18.64■□□□□ 0.57
HOXA2O43364 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXA2O43364 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA2O43364 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA2O43364 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HOXA2O43364 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 AL645939.2-201ENST00000427340 991 ntBASIC18.63■□□□□ 0.57
HOXA2O43364 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXA2O43364 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA2O43364 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA2O43364 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.63■□□□□ 0.57
HOXA2O43364 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXA2O43364 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HOXA2O43364 AL139327.4-201ENST00000612362 153 ntBASIC18.63■□□□□ 0.57
HOXA2O43364 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXA2O43364 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA2O43364 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms