Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 TSPY19P-201ENST00000418461 509 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 TSPY18P-201ENST00000441642 509 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.8■□□□□ 0.28
NDUFS4O43181 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 AC111152.3-201ENST00000569699 673 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 AC019129.2-201ENST00000609837 1235 ntBASIC16.8■□□□□ 0.28
NDUFS4O43181 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NDUFS4O43181 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.8■□□□□ 0.28
NDUFS4O43181 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
NDUFS4O43181 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFS4O43181 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NDUFS4O43181 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NDUFS4O43181 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.79■□□□□ 0.28
NDUFS4O43181 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NDUFS4O43181 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.79■□□□□ 0.28
NDUFS4O43181 AL049757.1-201ENST00000616842 1596 ntBASIC16.79■□□□□ 0.28
NDUFS4O43181 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NDUFS4O43181 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFS4O43181 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
NDUFS4O43181 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.78■□□□□ 0.28
NDUFS4O43181 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.78■□□□□ 0.28
NDUFS4O43181 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NDUFS4O43181 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 DUSP5P1-201ENST00000441325 1139 ntBASIC16.78■□□□□ 0.28
NDUFS4O43181 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.78■□□□□ 0.28
NDUFS4O43181 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.78■□□□□ 0.28
NDUFS4O43181 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.78■□□□□ 0.28
NDUFS4O43181 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.78■□□□□ 0.28
NDUFS4O43181 LINC01711-201ENST00000598340 967 ntBASIC16.78■□□□□ 0.28
NDUFS4O43181 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NDUFS4O43181 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 PP12613-201ENST00000424958 2230 ntBASIC16.78■□□□□ 0.28
NDUFS4O43181 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFS4O43181 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFS4O43181 KRT8P10-201ENST00000450021 1447 ntBASIC16.78■□□□□ 0.28
NDUFS4O43181 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms