Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 AC003669.1-201ENST00000334569 611 ntBASIC16.43■□□□□ 0.22
RRP8O43159 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 AP002414.1-201ENST00000391405 1147 ntBASIC16.43■□□□□ 0.22
RRP8O43159 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.43■□□□□ 0.22
RRP8O43159 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.43■□□□□ 0.22
RRP8O43159 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.43■□□□□ 0.22
RRP8O43159 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 AC112191.1-201ENST00000523689 701 ntBASIC16.43■□□□□ 0.22
RRP8O43159 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.43■□□□□ 0.22
RRP8O43159 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.43■□□□□ 0.22
RRP8O43159 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.43■□□□□ 0.22
RRP8O43159 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RRP8O43159 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RRP8O43159 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 NEFHP1-201ENST00000412845 2629 ntBASIC16.42■□□□□ 0.22
RRP8O43159 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 CNN2P2-201ENST00000443536 909 ntBASIC16.42■□□□□ 0.22
RRP8O43159 CNN2P3-201ENST00000450201 906 ntBASIC16.42■□□□□ 0.22
RRP8O43159 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.42■□□□□ 0.22
RRP8O43159 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.42■□□□□ 0.22
RRP8O43159 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.42■□□□□ 0.22
RRP8O43159 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.42■□□□□ 0.22
RRP8O43159 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 AL136317.3-201ENST00000618497 906 ntBASIC16.42■□□□□ 0.22
RRP8O43159 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.42■□□□□ 0.22
RRP8O43159 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RRP8O43159 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.42■□□□□ 0.22
RRP8O43159 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RRP8O43159 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms