Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 PKD1P5-201ENST00000532415 10291 ntBASIC16.44■□□□□ 0.22
AP3D1O14617 AL138688.1-201ENST00000624851 1594 ntBASIC16.44■□□□□ 0.22
AP3D1O14617 KRT89P-201ENST00000620027 1478 ntBASIC16.44■□□□□ 0.22
AP3D1O14617 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 PP12613-201ENST00000424958 2230 ntBASIC16.44■□□□□ 0.22
AP3D1O14617 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3D1O14617 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3D1O14617 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 AC063952.2-201ENST00000498792 1227 ntBASIC16.44■□□□□ 0.22
AP3D1O14617 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3D1O14617 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3D1O14617 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3D1O14617 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP3D1O14617 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
AP3D1O14617 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3D1O14617 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3D1O14617 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP3D1O14617 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3D1O14617 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3D1O14617 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3D1O14617 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3D1O14617 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 KRT18P65-201ENST00000439811 1286 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 DUX4L26-201ENST00000489078 1255 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 KRT18P21-201ENST00000515767 1272 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 AC022616.7-201ENST00000525383 220 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3D1O14617 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3D1O14617 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3D1O14617 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 AC011676.5-201ENST00000624864 2660 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 LINC01311-201ENST00000565162 1445 ntBASIC16.43■□□□□ 0.22
AP3D1O14617 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3D1O14617 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3D1O14617 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
AP3D1O14617 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP3D1O14617 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.42■□□□□ 0.22
AP3D1O14617 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3D1O14617 SPDYE13P-201ENST00000445314 798 ntBASIC16.42■□□□□ 0.22
AP3D1O14617 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.42■□□□□ 0.22
AP3D1O14617 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.42■□□□□ 0.22
AP3D1O14617 ZNF444P1-201ENST00000559497 298 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms