Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 AL138828.2-201ENST00000615812 383 ntBASIC18.48■□□□□ 0.55
SOX1O00570 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SOX1O00570 COX11-210ENST00000639671 696 ntBASIC18.48■□□□□ 0.55
SOX1O00570 AL109936.8-201ENST00000641772 604 ntBASIC18.48■□□□□ 0.55
SOX1O00570 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.47■□□□□ 0.55
SOX1O00570 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 AL499627.1-201ENST00000569373 2188 ntBASIC18.47■□□□□ 0.55
SOX1O00570 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.47■□□□□ 0.55
SOX1O00570 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.47■□□□□ 0.55
SOX1O00570 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.47■□□□□ 0.55
SOX1O00570 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 SNX29P1-201ENST00000548357 1007 ntBASIC18.47■□□□□ 0.55
SOX1O00570 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 AC009407.1-201ENST00000568958 598 ntBASIC18.47■□□□□ 0.55
SOX1O00570 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 AC099568.2-201ENST00000609194 695 ntBASIC18.47■□□□□ 0.55
SOX1O00570 AL645728.2-201ENST00000641974 660 ntBASIC18.47■□□□□ 0.55
SOX1O00570 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX1O00570 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX1O00570 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX1O00570 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX1O00570 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX1O00570 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.46■□□□□ 0.55
SOX1O00570 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX1O00570 ACTBP11-201ENST00000436287 1126 ntBASIC18.46■□□□□ 0.55
SOX1O00570 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SOX1O00570 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.46■□□□□ 0.55
SOX1O00570 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX1O00570 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SOX1O00570 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX1O00570 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SOX1O00570 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SOX1O00570 AC093677.2-201ENST00000600169 1863 ntBASIC18.46■□□□□ 0.54
SOX1O00570 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 KRT223P-202ENST00000449164 1292 ntBASIC18.45■□□□□ 0.54
SOX1O00570 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.45■□□□□ 0.54
SOX1O00570 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 MIR6775-201ENST00000617557 69 ntBASIC18.45■□□□□ 0.54
SOX1O00570 AL161645.1-201ENST00000622716 1255 ntBASIC18.45■□□□□ 0.54
SOX1O00570 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 AC009336.1-201ENST00000608941 1553 ntBASIC18.45■□□□□ 0.54
SOX1O00570 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX1O00570 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
SOX1O00570 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms