Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
CLDN5O00501 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN5O00501 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN5O00501 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN5O00501 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN5O00501 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
CLDN5O00501 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 SIGLEC30P-201ENST00000455569 941 ntBASIC18.47■□□□□ 0.55
CLDN5O00501 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.47■□□□□ 0.55
CLDN5O00501 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CLDN5O00501 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN5O00501 AL139327.4-201ENST00000612362 153 ntBASIC18.47■□□□□ 0.55
CLDN5O00501 AC107918.4-202ENST00000641623 219 ntBASIC18.47■□□□□ 0.55
CLDN5O00501 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 LYSMD4-203ENST00000378904 2122 ntBASIC18.47■□□□□ 0.55
CLDN5O00501 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN5O00501 AC133963.1-201ENST00000504166 1679 ntBASIC18.47■□□□□ 0.55
CLDN5O00501 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN5O00501 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 HCG11-201ENST00000411553 5696 ntBASIC18.46■□□□□ 0.55
CLDN5O00501 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 AL590627.1-203ENST00000421194 1026 ntBASIC18.46■□□□□ 0.55
CLDN5O00501 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN5O00501 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN5O00501 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN5O00501 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN5O00501 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 AC116407.3-201ENST00000623905 1129 ntBASIC18.46■□□□□ 0.55
CLDN5O00501 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN5O00501 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN5O00501 GNAS-203ENST00000306120 1878 ntBASIC18.46■□□□□ 0.54
CLDN5O00501 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN5O00501 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN5O00501 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN5O00501 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms