Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.54■□□□□ 0.24
CLIC1O00299 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CLIC1O00299 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIC1O00299 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLIC1O00299 AC139887.4-201ENST00000607877 719 ntBASIC16.54■□□□□ 0.24
CLIC1O00299 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIC1O00299 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIC1O00299 AL118508.1-201ENST00000613502 2345 ntBASIC16.54■□□□□ 0.24
CLIC1O00299 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLIC1O00299 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIC1O00299 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIC1O00299 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLIC1O00299 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIC1O00299 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLIC1O00299 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.53■□□□□ 0.24
CLIC1O00299 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLIC1O00299 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 BX664615.1-201ENST00000443558 458 ntBASIC16.53■□□□□ 0.24
CLIC1O00299 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.53■□□□□ 0.24
CLIC1O00299 AC093827.2-201ENST00000512654 315 ntBASIC16.53■□□□□ 0.24
CLIC1O00299 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.53■□□□□ 0.24
CLIC1O00299 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.53■□□□□ 0.24
CLIC1O00299 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.53■□□□□ 0.24
CLIC1O00299 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
CLIC1O00299 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLIC1O00299 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.53■□□□□ 0.24
CLIC1O00299 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 AGGF1P2-201ENST00000426656 2106 ntBASIC16.52■□□□□ 0.24
CLIC1O00299 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIC1O00299 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CLIC1O00299 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 AC002558.1-201ENST00000488906 803 ntBASIC16.52■□□□□ 0.24
CLIC1O00299 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.52■□□□□ 0.24
CLIC1O00299 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.52■□□□□ 0.24
CLIC1O00299 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
CLIC1O00299 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLIC1O00299 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLIC1O00299 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.52■□□□□ 0.24
CLIC1O00299 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLIC1O00299 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLIC1O00299 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLIC1O00299 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLIC1O00299 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLIC1O00299 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms