Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.86□□□□□ -0.35
NACAE9PAV3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 AL645929.1-201ENST00000420084 975 ntBASIC12.86□□□□□ -0.35
NACAE9PAV3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.86□□□□□ -0.35
NACAE9PAV3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 AC108860.2-201ENST00000562760 2183 ntBASIC12.86□□□□□ -0.35
NACAE9PAV3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 AC020916.1-201ENST00000587762 1774 ntBASIC12.86□□□□□ -0.35
NACAE9PAV3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 CROCCP1-201ENST00000426910 5675 ntBASIC12.86□□□□□ -0.35
NACAE9PAV3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 AC080080.1-201ENST00000625121 2420 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NACAE9PAV3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 IER3-202ENST00000376377 1350 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 RASA4DP-201ENST00000460726 1199 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 AC092597.1-201ENST00000487352 616 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.85□□□□□ -0.35
NACAE9PAV3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NACAE9PAV3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.85□□□□□ -0.35
NACAE9PAV3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NACAE9PAV3 AL391807.1-203ENST00000604392 2365 ntBASIC12.85□□□□□ -0.35
NACAE9PAV3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NACAE9PAV3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NACAE9PAV3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NACAE9PAV3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.84□□□□□ -0.35
NACAE9PAV3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NACAE9PAV3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms