Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
COLCA2A8K830 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
COLCA2A8K830 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COLCA2A8K830 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COLCA2A8K830 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COLCA2A8K830 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COLCA2A8K830 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COLCA2A8K830 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.45□□□□□ -0.26
COLCA2A8K830 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.45□□□□□ -0.26
COLCA2A8K830 AC005840.4-201ENST00000541242 2494 ntBASIC13.45□□□□□ -0.26
COLCA2A8K830 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.45□□□□□ -0.26
COLCA2A8K830 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.44□□□□□ -0.26
COLCA2A8K830 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.44□□□□□ -0.26
COLCA2A8K830 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.44□□□□□ -0.26
COLCA2A8K830 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 AC012414.1-201ENST00000556676 535 ntBASIC13.44□□□□□ -0.26
COLCA2A8K830 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 AL359183.1-201ENST00000623796 2132 ntBASIC13.44□□□□□ -0.26
COLCA2A8K830 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.44□□□□□ -0.26
COLCA2A8K830 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 LINC00528-201ENST00000600723 2160 ntBASIC13.44□□□□□ -0.26
COLCA2A8K830 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COLCA2A8K830 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COLCA2A8K830 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.43□□□□□ -0.26
COLCA2A8K830 AC010491.1-201ENST00000563101 2797 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 AC099343.3-201ENST00000605834 2503 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 AC007191.1-201ENST00000623179 2995 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
COLCA2A8K830 AC239859.2-201ENST00000444165 318 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 SDHAP2-201ENST00000455183 2001 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
COLCA2A8K830 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.43□□□□□ -0.26
COLCA2A8K830 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 MIR3621-201ENST00000580529 85 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 AL512631.2-201ENST00000604634 923 ntBASIC13.43□□□□□ -0.26
COLCA2A8K830 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COLCA2A8K830 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COLCA2A8K830 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
COLCA2A8K830 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.43□□□□□ -0.26
COLCA2A8K830 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
COLCA2A8K830 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COLCA2A8K830 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.42□□□□□ -0.26
COLCA2A8K830 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
COLCA2A8K830 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
COLCA2A8K830 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms