Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 MFAP1P1-201ENST00000442257 1255 ntBASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 AC110285.5-201ENST00000611501 352 ntBASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CR769767.2-201ENST00000622735 460 ntBASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 AC006058.4-201ENST00000624016 1670 ntBASIC12.37□□□□□ -0.43
LINC01546A6NGU7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01546A6NGU7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AC124016.1-201ENST00000609552 612 ntBASIC12.36□□□□□ -0.43
LINC01546A6NGU7 DGCR10-201ENST00000609839 495 ntBASIC12.36□□□□□ -0.43
LINC01546A6NGU7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.36□□□□□ -0.43
LINC01546A6NGU7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ME2P1-201ENST00000426028 1970 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms