Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 LINC00982-205ENST00000420957 435 ntBASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 AC004967.1-201ENST00000453589 447 ntBASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 AC134684.3-201ENST00000641758 218 ntBASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3BA6NDS4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 OR6D1P-202ENST00000641007 5290 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 PTCHD3P3-201ENST00000403073 906 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 AC018845.2-201ENST00000568326 409 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 AP001160.2-201ENST00000596071 487 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 AL805961.1-202ENST00000641562 540 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 GPR89P-201ENST00000407924 1495 ntBASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3BA6NDS4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 MCCD1P2-201ENST00000423228 335 ntBASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 HCG4B-203ENST00000450128 991 ntBASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 AC002310.6-201ENST00000624451 1377 ntBASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3BA6NDS4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3BA6NDS4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms