Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SBNO1A3KN83 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 BASP1P1-201ENST00000430708 665 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 AC005237.2-201ENST00000434368 219 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 TERF1P3-201ENST00000505638 1227 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 AC079140.1-201ENST00000508039 487 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 RN7SL204P-201ENST00000582831 262 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 AC129492.6-201ENST00000611383 1305 ntBASIC23.55■■□□□ 1.36
SBNO1A3KN83 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SBNO1A3KN83 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SBNO1A3KN83 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 VMA21-202ENST00000370361 693 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 FAM58DP-201ENST00000428076 619 ntBASIC23.54■■□□□ 1.36
SBNO1A3KN83 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 REXO1L9P-201ENST00000604264 2108 ntBASIC23.54■■□□□ 1.36
SBNO1A3KN83 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.54■■□□□ 1.36
SBNO1A3KN83 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SBNO1A3KN83 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 KRT18P32-201ENST00000424695 1287 ntBASIC23.53■■□□□ 1.36
SBNO1A3KN83 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SBNO1A3KN83 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SBNO1A3KN83 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 AL592309.1-201ENST00000443127 649 ntBASIC23.52■■□□□ 1.36
SBNO1A3KN83 FAM207CP-201ENST00000443486 507 ntBASIC23.52■■□□□ 1.36
SBNO1A3KN83 KLF2P3-201ENST00000451977 1087 ntBASIC23.52■■□□□ 1.36
SBNO1A3KN83 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 OARD1-208ENST00000469104 704 ntTSL 2 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 AC243562.1-201ENST00000560672 389 ntBASIC23.52■■□□□ 1.36
SBNO1A3KN83 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 AL645728.2-201ENST00000641974 660 ntBASIC23.52■■□□□ 1.36
SBNO1A3KN83 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.52■■□□□ 1.36
SBNO1A3KN83 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBNO1A3KN83 UGT1A2P-201ENST00000454886 866 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms