Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 AC016575.1-201ENST00000607026 382 ntBASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 PRAL-201ENST00000624952 3286 ntBASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.98□□□□□ -0.49
SPCS1Q9Y6A9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 AC018553.1-201ENST00000616682 1458 ntBASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 KRT8P45-201ENST00000414328 1447 ntBASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 AL359183.1-201ENST00000623796 2132 ntBASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.97□□□□□ -0.49
SPCS1Q9Y6A9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 AC120498.10-201ENST00000621827 505 ntBASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPCS1Q9Y6A9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms