Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TP73-AS1-207ENST00000624167 988 ntBASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 AL355312.1-201ENST00000407115 2176 ntBASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A3BPQ9Y5P4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 REXO1L11P-201ENST00000620964 1927 ntBASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 RBM17P3-201ENST00000417687 1192 ntBASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 AL355877.3-201ENST00000622820 899 ntBASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A3BPQ9Y5P4 LINC00304-203ENST00000565008 1864 ntBASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 AC133963.1-201ENST00000504166 1679 ntBASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 ABCD1P5-201ENST00000445663 754 ntBASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SLC25A6P4-201ENST00000586535 553 ntBASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.62■□□□□ 0.73
COL4A3BPQ9Y5P4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 MRPL3P1-201ENST00000400109 1033 ntBASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 MTDHP3-201ENST00000594186 672 ntBASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL4A3BPQ9Y5P4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms