Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AC009154.2-201ENST00000621177 724 ntBASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGB3Q9Y5G1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 AC022211.2-201ENST00000585075 2527 ntBASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 NFIC-211ENST00000641145 8399 ntBASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 TSPY12P-201ENST00000421279 868 ntBASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 KRT18P56-201ENST00000507275 550 ntBASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 AL121761.2-201ENST00000598007 1648 ntBASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB3Q9Y5G1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 MIR662-201ENST00000384847 95 ntBASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 AC092597.1-201ENST00000487352 616 ntBASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB3Q9Y5G1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 AL139384.1-201ENST00000612143 3047 ntBASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGB3Q9Y5G1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms