Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 AL138781.2-201ENST00000617896 1843 ntBASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 DNAJB3-201ENST00000446806 729 ntBASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NCKAP1Q9Y2A7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 STK25P1-201ENST00000585406 838 ntBASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKAP1Q9Y2A7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 AC148477.5-201ENST00000625164 1645 ntBASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 AC002558.1-201ENST00000488906 803 ntBASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKAP1Q9Y2A7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC090164.3-201ENST00000610780 2143 ntBASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCKAP1Q9Y2A7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms