Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC140658.5-201ENST00000438532 169 ntBASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 REXO1L3P-201ENST00000622202 1288 ntBASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 AC009093.7-201ENST00000623853 1223 ntBASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SHANK2Q9UPX8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
SHANK2Q9UPX8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 AC004461.1-201ENST00000412461 403 ntBASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 AL513480.1-201ENST00000451731 511 ntBASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SHANK2Q9UPX8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 AC023141.5-201ENST00000458585 616 ntBASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 AC112191.1-201ENST00000523689 701 ntBASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 AC105339.1-204ENST00000636249 355 ntBASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.81■■□□□ 1.72
SHANK2Q9UPX8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC25.8■■□□□ 1.72
SHANK2Q9UPX8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AC093028.1-201ENST00000622998 982 ntBASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AL121761.2-201ENST00000598007 1648 ntBASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.79■■□□□ 1.72
SHANK2Q9UPX8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHANK2Q9UPX8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms