Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC9Q9UKV0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 ACTG1P4-201ENST00000425123 1122 ntBASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 CXCL1P1-201ENST00000502804 216 ntBASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 AC027612.4-201ENST00000605371 583 ntBASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 AC091812.2-201ENST00000619081 385 ntBASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC9Q9UKV0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 TSEN15P1-201ENST00000423257 515 ntBASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 PAWRP1-201ENST00000451083 565 ntBASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 SPCS2P1-201ENST00000561636 679 ntBASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC9Q9UKV0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC9Q9UKV0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 AC092474.2-201ENST00000424288 719 ntBASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 AC004835.2-201ENST00000603762 682 ntBASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC9Q9UKV0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms