Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 BAD-207ENST00000544785 525 ntTSL 3 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 AC243562.1-201ENST00000560672 389 ntBASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 RN7SL204P-201ENST00000582831 262 ntBASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PHRF1Q9P1Y6 REXO1L9P-201ENST00000604264 2108 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 TNXA-203ENST00000507684 2038 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AC005034.1-201ENST00000426657 489 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AC244107.1-201ENST00000442033 332 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 FAM207CP-201ENST00000443486 507 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AC140878.1-201ENST00000565277 250 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AC107890.1-201ENST00000422478 521 ntBASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PHRF1Q9P1Y6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AL020996.1-203ENST00000536896 2307 ntBASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AL592309.1-201ENST00000443127 649 ntBASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PHRF1Q9P1Y6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AKAP8P1-201ENST00000434743 1349 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AC055876.3-201ENST00000431496 288 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AC007274.1-201ENST00000439805 662 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AL512356.2-201ENST00000546955 174 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AC138649.4-201ENST00000612222 287 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 AL645728.2-201ENST00000641974 660 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 LINC00304-203ENST00000565008 1864 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 FO538757.1-201ENST00000623083 1397 ntBASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PHRF1Q9P1Y6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 FAM86C2P-203ENST00000528684 1004 ntBASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 DUX4L17-201ENST00000557360 1267 ntBASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 AL158211.3-201ENST00000607385 239 ntBASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 AC008761.3-201ENST00000624803 892 ntBASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PHRF1Q9P1Y6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms