Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNIH4Q9P003 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH4Q9P003 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 PCDHA12-202ENST00000613593 2588 ntBASIC16.44■□□□□ 0.22
CNIH4Q9P003 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 SIRPAP1-201ENST00000448467 1770 ntBASIC16.44■□□□□ 0.22
CNIH4Q9P003 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 AP005901.3-202ENST00000581653 237 ntBASIC16.44■□□□□ 0.22
CNIH4Q9P003 AC012313.10-201ENST00000623509 926 ntBASIC16.44■□□□□ 0.22
CNIH4Q9P003 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH4Q9P003 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNIH4Q9P003 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 TSPY19P-201ENST00000418461 509 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 TSPY18P-201ENST00000441642 509 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 KRT16P4-201ENST00000453883 522 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 FOSL1P1-201ENST00000511041 816 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 AC009533.2-201ENST00000543664 586 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 AC091304.2-201ENST00000564639 760 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 AC009053.2-201ENST00000563701 2365 ntBASIC16.43■□□□□ 0.22
CNIH4Q9P003 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CNIH4Q9P003 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH4Q9P003 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH4Q9P003 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 AC091607.1-201ENST00000490318 1060 ntBASIC16.42■□□□□ 0.22
CNIH4Q9P003 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH4Q9P003 AC111152.3-201ENST00000569699 673 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms