Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 RBM17P3-201ENST00000417687 1192 ntBASIC16.32■□□□□ 0.2
HPF1Q9NWY4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 AP002469.2-201ENST00000531724 424 ntBASIC16.32■□□□□ 0.2
HPF1Q9NWY4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 AC104692.2-201ENST00000603054 253 ntBASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.32■□□□□ 0.2
HPF1Q9NWY4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 ABCD1P5-201ENST00000445663 754 ntBASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC106795.1-205ENST00000512851 1056 ntBASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 MTDHP3-201ENST00000594186 672 ntBASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC064862.7-201ENST00000604520 867 ntBASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.31■□□□□ 0.2
HPF1Q9NWY4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AC010460.3-201ENST00000511359 1579 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 SCARNA2-201ENST00000458748 420 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AC122714.2-201ENST00000502787 707 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AL662844.1-201ENST00000546340 181 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AP001269.4-201ENST00000609611 512 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 AL355877.3-201ENST00000622820 899 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.3■□□□□ 0.2
HPF1Q9NWY4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPF1Q9NWY4 FLJ13224-201ENST00000313737 1514 ntBASIC16.29■□□□□ 0.2
HPF1Q9NWY4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms