Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AC120114.3-201ENST00000611923 658 ntBASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G1Q9HCP0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 GPR89P-201ENST00000407924 1495 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 ELK2BP-201ENST00000415014 1224 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 AP000347.1-202ENST00000435868 847 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 AC145285.3-201ENST00000564603 959 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 AC117500.6-201ENST00000624871 588 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 PGM5P2-202ENST00000637225 1043 ntBASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.27■□□□□ 0.52
CSNK1G1Q9HCP0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G1Q9HCP0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 AL022342.1-201ENST00000400363 863 ntBASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G1Q9HCP0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 RPL13AP23-201ENST00000480739 586 ntBASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 MIR1199-201ENST00000621445 119 ntBASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G1Q9HCP0 AL590787.1-201ENST00000568856 1315 ntBASIC18.24■□□□□ 0.51
CSNK1G1Q9HCP0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms