Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
CNTNAP4Q9C0A0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 INGX-202ENST00000489074 768 ntBASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 AC087641.1-201ENST00000557561 1021 ntBASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP4Q9C0A0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP4Q9C0A0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 MIR661-201ENST00000384842 89 ntBASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 AC015922.1-201ENST00000421102 1152 ntBASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 BASP1P1-201ENST00000430708 665 ntBASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 KLF2P3-201ENST00000451977 1087 ntBASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP4Q9C0A0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 REXO1L11P-201ENST00000620964 1927 ntBASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 TUBB3P1-201ENST00000405796 1332 ntBASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.87■■□□□ 1.09
CNTNAP4Q9C0A0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.86■■□□□ 1.09
CNTNAP4Q9C0A0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms