Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 ADH5P3-201ENST00000433842 1137 ntBASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 AL158211.3-201ENST00000607385 239 ntBASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNTNAP3Q9BZ76 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 KRT18P32-201ENST00000424695 1287 ntBASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 AC026120.1-201ENST00000611536 926 ntBASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 REXO1L6P-201ENST00000603433 1515 ntBASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNTNAP3Q9BZ76 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CNTNAP3Q9BZ76 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CNTNAP3Q9BZ76 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CNTNAP3Q9BZ76 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 SIGLEC16-201ENST00000599858 1437 ntBASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNTNAP3Q9BZ76 AC079776.1-201ENST00000401540 1152 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms