Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AC112698.1-201ENST00000510299 916 ntBASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AL138966.2-201ENST00000621997 464 ntBASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 AC018695.7-201ENST00000624587 2492 ntBASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDHD3Q9BSH5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HDHD3Q9BSH5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 BX276092.7-203ENST00000637198 1536 ntBASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 TSPY12P-201ENST00000421279 868 ntBASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 PCDHA14-201ENST00000506751 2298 ntBASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.83□□□□□ -0.04
HDHD3Q9BSH5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 AC079328.2-201ENST00000561241 3354 ntBASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SPDYE15P-201ENST00000424157 909 ntBASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 KRT18P48-201ENST00000434763 852 ntBASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 AC009154.2-201ENST00000621177 724 ntBASIC14.82□□□□□ -0.04
HDHD3Q9BSH5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms