Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.35□□□□□ -0.27
VGLL1Q99990 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VGLL1Q99990 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VGLL1Q99990 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VGLL1Q99990 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 KRT8P47-201ENST00000604727 1398 ntBASIC13.34□□□□□ -0.27
VGLL1Q99990 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
VGLL1Q99990 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.34□□□□□ -0.27
VGLL1Q99990 AC113404.2-201ENST00000507884 177 ntBASIC13.34□□□□□ -0.27
VGLL1Q99990 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.34□□□□□ -0.27
VGLL1Q99990 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.34□□□□□ -0.27
VGLL1Q99990 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 CICP6-201ENST00000457191 2729 ntBASIC13.34□□□□□ -0.27
VGLL1Q99990 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VGLL1Q99990 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
VGLL1Q99990 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
VGLL1Q99990 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VGLL1Q99990 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
VGLL1Q99990 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
VGLL1Q99990 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
VGLL1Q99990 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.33□□□□□ -0.27
VGLL1Q99990 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
VGLL1Q99990 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.27
VGLL1Q99990 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.33□□□□□ -0.27
VGLL1Q99990 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
VGLL1Q99990 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.33□□□□□ -0.27
VGLL1Q99990 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.33□□□□□ -0.28
VGLL1Q99990 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.33□□□□□ -0.28
VGLL1Q99990 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.33□□□□□ -0.28
VGLL1Q99990 HMGA1P5-201ENST00000412453 271 ntBASIC13.33□□□□□ -0.28
VGLL1Q99990 DDX43P3-201ENST00000441064 443 ntBASIC13.33□□□□□ -0.28
VGLL1Q99990 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.33□□□□□ -0.28
VGLL1Q99990 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
VGLL1Q99990 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.33□□□□□ -0.28
VGLL1Q99990 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VGLL1Q99990 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms