Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.37■□□□□ 0.53
SMOQ99835 RPS2P28-201ENST00000314255 741 ntBASIC18.37■□□□□ 0.53
SMOQ99835 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.37■□□□□ 0.53
SMOQ99835 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.37■□□□□ 0.53
SMOQ99835 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.37■□□□□ 0.53
SMOQ99835 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.37■□□□□ 0.53
SMOQ99835 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SMOQ99835 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.37■□□□□ 0.53
SMOQ99835 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 AL589182.2-201ENST00000619332 1049 ntBASIC18.37■□□□□ 0.53
SMOQ99835 AC116407.3-201ENST00000623905 1129 ntBASIC18.37■□□□□ 0.53
SMOQ99835 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMOQ99835 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
SMOQ99835 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMOQ99835 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
SMOQ99835 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.36■□□□□ 0.53
SMOQ99835 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.36■□□□□ 0.53
SMOQ99835 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SMOQ99835 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.36■□□□□ 0.53
SMOQ99835 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SMOQ99835 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.36■□□□□ 0.53
SMOQ99835 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.36■□□□□ 0.53
SMOQ99835 AC139887.3-201ENST00000568585 713 ntBASIC18.36■□□□□ 0.53
SMOQ99835 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.36■□□□□ 0.53
SMOQ99835 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.36■□□□□ 0.53
SMOQ99835 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.36■□□□□ 0.53
SMOQ99835 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.36■□□□□ 0.53
SMOQ99835 AL135999.2-201ENST00000622438 1686 ntBASIC18.36■□□□□ 0.53
SMOQ99835 AC097637.2-201ENST00000624096 1997 ntBASIC18.36■□□□□ 0.53
SMOQ99835 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
SMOQ99835 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMOQ99835 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.35■□□□□ 0.53
SMOQ99835 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 AP002414.3-201ENST00000589352 1468 ntBASIC18.35■□□□□ 0.53
SMOQ99835 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 IL9RP2-201ENST00000423948 1312 ntBASIC18.35■□□□□ 0.53
SMOQ99835 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.35■□□□□ 0.53
SMOQ99835 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.35■□□□□ 0.53
SMOQ99835 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 AL590627.1-203ENST00000421194 1026 ntBASIC18.35■□□□□ 0.53
SMOQ99835 KRT18P27-201ENST00000427733 1299 ntBASIC18.35■□□□□ 0.53
SMOQ99835 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.35■□□□□ 0.53
SMOQ99835 AP000347.1-202ENST00000435868 847 ntBASIC18.35■□□□□ 0.53
SMOQ99835 AC093909.1-201ENST00000504731 1122 ntBASIC18.35■□□□□ 0.53
SMOQ99835 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.35■□□□□ 0.53
SMOQ99835 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.35■□□□□ 0.53
SMOQ99835 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 AC105339.3-201ENST00000560043 636 ntBASIC18.35■□□□□ 0.53
SMOQ99835 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SMOQ99835 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.35■□□□□ 0.53
SMOQ99835 AC004706.3-202ENST00000621574 984 ntBASIC18.35■□□□□ 0.53
SMOQ99835 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SMOQ99835 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMOQ99835 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms