Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 HNRNPDP1-201ENST00000439535 754 ntBASIC13.67□□□□□ -0.22
DUX3Q96PT4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 AC064862.7-201ENST00000604520 867 ntBASIC13.67□□□□□ -0.22
DUX3Q96PT4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SIRPAP1-201ENST00000448467 1770 ntBASIC13.67□□□□□ -0.22
DUX3Q96PT4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DUX3Q96PT4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX3Q96PT4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 AC022898.2-201ENST00000616822 1312 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 FAM220CP-201ENST00000395253 831 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 RBM17P3-201ENST00000417687 1192 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 RPS2P1-201ENST00000434010 821 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 SCARNA2-201ENST00000458748 420 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 RNA5SP419-201ENST00000515908 135 ntBASIC13.66□□□□□ -0.22
DUX3Q96PT4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
DUX3Q96PT4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX3Q96PT4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 IL9RP2-201ENST00000423948 1312 ntBASIC13.65□□□□□ -0.22
DUX3Q96PT4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.65□□□□□ -0.22
DUX3Q96PT4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DUX3Q96PT4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms