Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC47A1Q96FL8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 ECEL1P3-201ENST00000427961 737 ntBASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 MIR3917-201ENST00000580971 93 ntBASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SLC47A1Q96FL8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC47A1Q96FL8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC47A1Q96FL8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms