Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 OR7E14P-202ENST00000530490 1290 ntBASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 AP001005.1-201ENST00000571755 1248 ntBASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 MIR7706-201ENST00000613747 67 ntBASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ECHDC3Q96DC8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ECHDC3Q96DC8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
ECHDC3Q96DC8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 RPS2P28-201ENST00000314255 741 ntBASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 AL049840.3-201ENST00000602669 611 ntBASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ECHDC3Q96DC8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms