Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 AL353692.3-201ENST00000407031 1396 ntBASIC19.81■□□□□ 0.76
SMARCE1Q969G3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCE1Q969G3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 AC012306.2-201ENST00000609350 630 ntBASIC19.8■□□□□ 0.76
SMARCE1Q969G3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCE1Q969G3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 MIR662-201ENST00000384847 95 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 AC117947.1-201ENST00000427448 529 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 AC005104.2-201ENST00000427818 678 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 LYSMD4-203ENST00000378904 2122 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 AL121761.2-201ENST00000598007 1648 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCE1Q969G3 AC046158.3-201ENST00000624947 2558 ntBASIC19.79■□□□□ 0.76
SMARCE1Q969G3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 MTCL1P1-201ENST00000446207 792 ntBASIC19.78■□□□□ 0.76
SMARCE1Q969G3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 GPR32P1-201ENST00000601788 811 ntBASIC19.78■□□□□ 0.76
SMARCE1Q969G3 AC097493.4-201ENST00000641197 219 ntBASIC19.78■□□□□ 0.76
SMARCE1Q969G3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.78■□□□□ 0.76
SMARCE1Q969G3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMARCE1Q969G3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms