Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.87■■□□□ 1.25
RTF1Q92541 POLD2P1-201ENST00000511220 997 ntBASIC22.87■■□□□ 1.25
RTF1Q92541 AC034105.1-201ENST00000563488 319 ntBASIC22.87■■□□□ 1.25
RTF1Q92541 TERC-201ENST00000602385 541 ntBASIC22.87■■□□□ 1.25
RTF1Q92541 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.87■■□□□ 1.25
RTF1Q92541 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.87■■□□□ 1.25
RTF1Q92541 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.87■■□□□ 1.25
RTF1Q92541 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RTF1Q92541 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTF1Q92541 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RTF1Q92541 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
RTF1Q92541 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.86■■□□□ 1.25
RTF1Q92541 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RTF1Q92541 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.86■■□□□ 1.25
RTF1Q92541 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.86■■□□□ 1.25
RTF1Q92541 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RTF1Q92541 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.86■■□□□ 1.25
RTF1Q92541 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 AC097637.2-201ENST00000624096 1997 ntBASIC22.86■■□□□ 1.25
RTF1Q92541 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.86■■□□□ 1.25
RTF1Q92541 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RTF1Q92541 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTF1Q92541 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.85■■□□□ 1.25
RTF1Q92541 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.85■■□□□ 1.25
RTF1Q92541 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RTF1Q92541 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.85■■□□□ 1.25
RTF1Q92541 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.85■■□□□ 1.25
RTF1Q92541 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.85■■□□□ 1.25
RTF1Q92541 AC023511.2-201ENST00000618803 211 ntBASIC22.85■■□□□ 1.25
RTF1Q92541 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.85■■□□□ 1.25
RTF1Q92541 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.85■■□□□ 1.25
RTF1Q92541 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTF1Q92541 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.85■■□□□ 1.25
RTF1Q92541 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.84■■□□□ 1.25
RTF1Q92541 AC027601.4-201ENST00000611259 610 ntBASIC22.84■■□□□ 1.25
RTF1Q92541 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RTF1Q92541 AC090340.1-201ENST00000620778 4980 ntBASIC22.84■■□□□ 1.25
RTF1Q92541 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
RTF1Q92541 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTF1Q92541 AC006504.4-201ENST00000592118 1568 ntBASIC22.84■■□□□ 1.25
RTF1Q92541 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms