Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
SYNE2Q8WXH0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC7□□□□□ -1.29
SYNE2Q8WXH0 IQSEC3P1-201ENST00000538799 536 ntBASIC7□□□□□ -1.29
SYNE2Q8WXH0 CHMP4BP1-201ENST00000556017 588 ntBASIC7□□□□□ -1.29
SYNE2Q8WXH0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
SYNE2Q8WXH0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SYNE2Q8WXH0 FTLP1-201ENST00000449155 526 ntBASIC7□□□□□ -1.29
SYNE2Q8WXH0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC7□□□□□ -1.29
SYNE2Q8WXH0 IGHV3-62-201ENST00000520057 340 ntBASIC7□□□□□ -1.29
SYNE2Q8WXH0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC7□□□□□ -1.29
SYNE2Q8WXH0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 HLA-DQB2-229ENST00000411527 1059 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC010328.2-201ENST00000597698 1111 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 FEM1AP3-201ENST00000403722 1741 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC027139.1-201ENST00000565286 951 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC006128.1-201ENST00000624704 1661 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC233724.13-201ENST00000598383 410 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AKR7A2P1-201ENST00000460134 915 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AP000812.2-201ENST00000538934 718 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 AL049757.1-201ENST00000616842 1596 ntBASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC6.99□□□□□ -1.29
SYNE2Q8WXH0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 OSM-203ENST00000403463 464 ntTSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 EEF1DP6-201ENST00000449232 372 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 RARRES2P8-201ENST00000566335 367 ntBASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SYNE2Q8WXH0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms