Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 IGHV3-52-201ENST00000519770 353 ntBASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 AC007064.4-201ENST00000637740 555 ntBASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CFAP43Q8NDM7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CFAP43Q8NDM7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
CFAP43Q8NDM7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
CFAP43Q8NDM7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 MED16-214ENST00000617672 554 ntTSL 5 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.94
CFAP43Q8NDM7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 AC002472.2-201ENST00000442739 958 ntBASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 MEIS3P1-201ENST00000495167 958 ntBASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 AC023141.13-201ENST00000604991 943 ntBASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 AC025580.3-201ENST00000617932 1424 ntBASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.19■■□□□ 1.94
CFAP43Q8NDM7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 NMU-203ENST00000507338 658 ntTSL 3 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 AC051619.7-201ENST00000568314 623 ntBASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC27.18■■□□□ 1.94
CFAP43Q8NDM7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 GGTLC5P-201ENST00000617623 998 ntBASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AC063926.2-201ENST00000623766 1308 ntBASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 SLC25A1P3-201ENST00000395415 828 ntBASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 DUT-210ENST00000559935 569 ntTSL 3 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC27.17■■□□□ 1.94
CFAP43Q8NDM7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CFAP43Q8NDM7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms