Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP38Q8NB14 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.59■□□□□ 0.73
USP38Q8NB14 AC012640.2-201ENST00000561606 901 ntBASIC19.59■□□□□ 0.73
USP38Q8NB14 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.59■□□□□ 0.73
USP38Q8NB14 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.59■□□□□ 0.73
USP38Q8NB14 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP38Q8NB14 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP38Q8NB14 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.59■□□□□ 0.73
USP38Q8NB14 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
USP38Q8NB14 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.59■□□□□ 0.73
USP38Q8NB14 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP38Q8NB14 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 HLA-J-201ENST00000462773 1622 ntBASIC19.58■□□□□ 0.73
USP38Q8NB14 AC093677.2-201ENST00000600169 1863 ntBASIC19.58■□□□□ 0.73
USP38Q8NB14 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USP38Q8NB14 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
USP38Q8NB14 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
USP38Q8NB14 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.58■□□□□ 0.73
USP38Q8NB14 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP38Q8NB14 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP38Q8NB14 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP38Q8NB14 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.58■□□□□ 0.72
USP38Q8NB14 AC023274.1-201ENST00000418278 595 ntBASIC19.58■□□□□ 0.72
USP38Q8NB14 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.58■□□□□ 0.72
USP38Q8NB14 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.58■□□□□ 0.72
USP38Q8NB14 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.58■□□□□ 0.72
USP38Q8NB14 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
USP38Q8NB14 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.58■□□□□ 0.72
USP38Q8NB14 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 AP000867.4-201ENST00000641616 219 ntBASIC19.58■□□□□ 0.72
USP38Q8NB14 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP38Q8NB14 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP38Q8NB14 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.58■□□□□ 0.72
USP38Q8NB14 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP38Q8NB14 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.58■□□□□ 0.72
USP38Q8NB14 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
USP38Q8NB14 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
USP38Q8NB14 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 AC134043.2-201ENST00000624206 2238 ntBASIC19.57■□□□□ 0.72
USP38Q8NB14 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.57■□□□□ 0.72
USP38Q8NB14 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.57■□□□□ 0.72
USP38Q8NB14 RPS2P1-201ENST00000434010 821 ntBASIC19.57■□□□□ 0.72
USP38Q8NB14 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
USP38Q8NB14 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.57■□□□□ 0.72
USP38Q8NB14 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
USP38Q8NB14 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP38Q8NB14 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
USP38Q8NB14 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP38Q8NB14 LINC00896-202ENST00000609602 2128 ntBASIC19.57■□□□□ 0.72
USP38Q8NB14 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
USP38Q8NB14 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP38Q8NB14 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.56■□□□□ 0.72
USP38Q8NB14 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.56■□□□□ 0.72
USP38Q8NB14 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.56■□□□□ 0.72
USP38Q8NB14 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
USP38Q8NB14 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC096633.1-201ENST00000422446 749 ntBASIC19.56■□□□□ 0.72
USP38Q8NB14 AC007967.2-201ENST00000432613 625 ntBASIC19.56■□□□□ 0.72
USP38Q8NB14 AC007967.3-201ENST00000434308 558 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms