Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DNAAF3Q8N9W5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DNAAF3Q8N9W5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 AL049597.2-201ENST00000565575 961 ntBASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 AC124864.1-201ENST00000623408 392 ntBASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DNAAF3Q8N9W5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AC096633.1-201ENST00000422446 749 ntBASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AL136038.3-201ENST00000561909 1096 ntBASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 IGHV3-41-201ENST00000613121 348 ntBASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.88■□□□□ 0.45
DNAAF3Q8N9W5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DNAAF3Q8N9W5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNAAF3Q8N9W5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNAAF3Q8N9W5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DNAAF3Q8N9W5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms