Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TSSC2-201ENST00000450217 709 ntBASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 AC002558.1-201ENST00000488906 803 ntBASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 AL138831.2-201ENST00000606564 490 ntBASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 AC010460.3-201ENST00000511359 1579 ntBASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TTC9CQ8N5M4 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.9□□□□□ -0.19
TTC9CQ8N5M4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
TTC9CQ8N5M4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.9□□□□□ -0.19
TTC9CQ8N5M4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
TTC9CQ8N5M4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AC122714.2-201ENST00000502787 707 ntBASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AP000550.4-202ENST00000639755 178 ntBASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 KRT18P1-202ENST00000452408 1331 ntBASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TTC9CQ8N5M4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 AC009533.2-201ENST00000543664 586 ntBASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 AC005336.2-201ENST00000593183 939 ntBASIC13.88□□□□□ -0.19
TTC9CQ8N5M4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms