Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 DRAXINP1-201ENST00000437611 948 ntBASIC21.69■■□□□ 1.06
SMC5Q8IY18 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 AC233702.3-201ENST00000578656 1387 ntBASIC21.69■■□□□ 1.06
SMC5Q8IY18 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 AC124067.4-201ENST00000519691 2379 ntBASIC21.69■■□□□ 1.06
SMC5Q8IY18 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 AC106886.4-201ENST00000623557 2502 ntBASIC21.69■■□□□ 1.06
SMC5Q8IY18 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 TPSP2-201ENST00000561760 610 ntBASIC21.68■■□□□ 1.06
SMC5Q8IY18 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.68■■□□□ 1.06
SMC5Q8IY18 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 AC132938.5-201ENST00000624980 1813 ntBASIC21.68■■□□□ 1.06
SMC5Q8IY18 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMC5Q8IY18 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC5Q8IY18 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 TSSC2-201ENST00000450217 709 ntBASIC21.67■■□□□ 1.06
SMC5Q8IY18 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 AC084018.2-201ENST00000613093 2607 ntBASIC21.67■■□□□ 1.06
SMC5Q8IY18 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC5Q8IY18 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SMC5Q8IY18 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.66■■□□□ 1.06
SMC5Q8IY18 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.66■■□□□ 1.06
SMC5Q8IY18 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMC5Q8IY18 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC5Q8IY18 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms