Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 AC012640.2-201ENST00000561606 901 ntBASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 AC073592.4-201ENST00000623827 446 ntBASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SCN4BQ8IWT1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN4BQ8IWT1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.52■□□□□ 0.55
SCN4BQ8IWT1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SCN4BQ8IWT1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN4BQ8IWT1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 AC003669.1-201ENST00000334569 611 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 STK19B-204ENST00000512515 211 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 AC107918.4-202ENST00000641623 219 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 AC148477.5-201ENST00000625164 1645 ntBASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN4BQ8IWT1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 AC008735.5-201ENST00000623544 497 ntBASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN4BQ8IWT1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 LAGE3P1-201ENST00000425356 484 ntBASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN4BQ8IWT1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms