Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 AL136038.3-201ENST00000561909 1096 ntBASIC18.27■□□□□ 0.52
RFX6Q8HWS3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX6Q8HWS3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.27■□□□□ 0.51
RFX6Q8HWS3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.27■□□□□ 0.51
RFX6Q8HWS3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 AP001094.4-201ENST00000579008 2176 ntBASIC18.26■□□□□ 0.51
RFX6Q8HWS3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 RN7SL606P-201ENST00000472779 293 ntBASIC18.26■□□□□ 0.51
RFX6Q8HWS3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 AL049597.2-201ENST00000565575 961 ntBASIC18.26■□□□□ 0.51
RFX6Q8HWS3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX6Q8HWS3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 AC097374.2-201ENST00000618617 1306 ntBASIC18.25■□□□□ 0.51
RFX6Q8HWS3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX6Q8HWS3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX6Q8HWS3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
RFX6Q8HWS3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX6Q8HWS3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms