Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 AL139384.1-201ENST00000612143 3047 ntBASIC16.79■□□□□ 0.28
RAB43Q86YS6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 AL031284.1-201ENST00000419297 478 ntBASIC16.79■□□□□ 0.28
RAB43Q86YS6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 AC011467.2-201ENST00000598425 242 ntBASIC16.79■□□□□ 0.28
RAB43Q86YS6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 GMCL1P1-201ENST00000463439 1581 ntBASIC16.79■□□□□ 0.28
RAB43Q86YS6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB43Q86YS6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB43Q86YS6 AC125634.1-201ENST00000438758 1403 ntBASIC16.79■□□□□ 0.28
RAB43Q86YS6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 PCDHA12-202ENST00000613593 2588 ntBASIC16.78■□□□□ 0.28
RAB43Q86YS6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 MTDHP3-201ENST00000594186 672 ntBASIC16.78■□□□□ 0.28
RAB43Q86YS6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 INTS4P1-201ENST00000438455 1935 ntBASIC16.78■□□□□ 0.28
RAB43Q86YS6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB43Q86YS6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB43Q86YS6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC084018.2-201ENST00000613093 2607 ntBASIC16.77■□□□□ 0.28
RAB43Q86YS6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB43Q86YS6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC112698.1-201ENST00000510299 916 ntBASIC16.77■□□□□ 0.28
RAB43Q86YS6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
RAB43Q86YS6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms