Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM4Q86VH4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM4Q86VH4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 AL355312.1-201ENST00000407115 2176 ntBASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 AC009336.1-201ENST00000608941 1553 ntBASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 AC018712.1-201ENST00000455767 687 ntBASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 MTDHP4-201ENST00000600287 670 ntBASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM4Q86VH4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRTM4Q86VH4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRTM4Q86VH4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRTM4Q86VH4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC018470.1-201ENST00000624790 3129 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 PRYP5-201ENST00000451909 266 ntBASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRTM4Q86VH4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms