Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ZFHX4Q86UP3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 TP53TG3HP-202ENST00000569755 579 ntBASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AC023141.13-201ENST00000604991 943 ntBASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AC122714.2-201ENST00000502787 707 ntBASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZFHX4Q86UP3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 AC009949.1-201ENST00000623048 1830 ntBASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 AC092580.3-201ENST00000430932 139 ntBASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 AL583810.1-201ENST00000553344 1045 ntBASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 COX11-210ENST00000639671 696 ntBASIC16.27■□□□□ 0.2
ZFHX4Q86UP3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.27■□□□□ 0.19
ZFHX4Q86UP3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms